Pixel clusters using information from cell-based clustering: Gaussian blur sigma=2, pixel clusters hClusters using z-score cap=3 and iter thresh=3, normalize by size, k=20
Candace Liu
May 26, 2020
1 Heatmaps of pixel clusters x markers
2 Cell-based FlowSOM clustering using pixel clusters
2.1 Cell cluster x frequency of pixel clusters
2.2 Cell cluster x marker
3 New pixel clusters using information from cell clusters